Depth
- BamIndexError
- CLI
- Config
- ConfigError
- Core
  - Cigar
  - Coverage
  - CoverageCalculator
  - CoverageResult
  - CoverageUtils
  - Options
  - Region
  - Target
- CoverageCalculationError
- Error
- FileIO
  - D4Output
  - OutputManager
    - BgzfLineBuffer
- FileNotFoundError
- InvalidRegionError
- OutputError
- OutputSettings
- RunError
- Runner
- Stats
HTS
- Bam
  - Record
Mopdepth
- CancelledError
- ClosedError
- Control
- Coverage
- CoverageOverflowError
- CoverageStatus
- Error
- IndexError
- InputError
- Mode
- Options
- Progress
- Reader
- Region
- Stage
- Target
- UnknownReferenceError

class Mopdepth::UnknownReferenceError

Defined in:

mopdepth/errors.cr