struct
Depth::Core::Options
- Depth::Core::Options
- Struct
- Value
- Object
Defined in:
depth/core/options.crConstructors
Instance Method Summary
- #clone
- #copy_with(mapq _mapq = @mapq, min_frag_len _min_frag_len = @min_frag_len, max_frag_len _max_frag_len = @max_frag_len, exclude_flag _exclude_flag = @exclude_flag, include_flag _include_flag = @include_flag, fast_mode _fast_mode = @fast_mode, fragment_mode _fragment_mode = @fragment_mode, read_groups _read_groups = @read_groups)
- #exclude_flag : UInt16
- #fast_mode : Bool
- #fragment_mode : Bool
- #include_flag : UInt16
- #mapq : Int32
- #max_frag_len : Int32
- #min_frag_len : Int32
- #read_groups : Array(String)
Constructor Detail
def self.new(mapq : Int32 = 0, min_frag_len : Int32 = -1, max_frag_len : Int32 = Int32::MAX, exclude_flag : UInt16 = 1796_u16, include_flag : UInt16 = 0_u16, fast_mode : Bool = false, fragment_mode : Bool = false, read_groups : Array(String) = [] of String)
#
Instance Method Detail
def copy_with(mapq _mapq = @mapq, min_frag_len _min_frag_len = @min_frag_len, max_frag_len _max_frag_len = @max_frag_len, exclude_flag _exclude_flag = @exclude_flag, include_flag _include_flag = @include_flag, fast_mode _fast_mode = @fast_mode, fragment_mode _fragment_mode = @fragment_mode, read_groups _read_groups = @read_groups)
#