Class: Bio::TwoBit::ReferenceGenome

Inherits:

TwoBit

• Object
• TwoBit
• Bio::TwoBit::ReferenceGenome

Defined in:

lib/bio/twobit/reference_genome.rb

Direct Known Subclasses

AilMel1, AllMis1, AnoCar2, AnoGam3, ApiMel2, AplCal1, AptMan1, AquChr2, BalAcu1, BosTau7, BraFlo1, CaeJap1, CaePb2, CaeRem3, CalJac4, CalMil1, CanFam4, CanFam6, Cb3, Ce11, CerSim1, ChlSab2, ChoHof1, ChrPic1, Ci2, CriGriChoV2, DanRer10, DanRer11, DasNov3, DipOrd1, Dm6, Dp3, DroAna2, DroEre1, DroGri1, DroMoj2, DroPer1, DroSec1, DroSim1, DroVir2, DroYak2, EboVir3, EchTel2, EquCab3, EriEur2, FelCat9, Fr2, GadMor1, GalGal6, GeoFor1, GorGor6, HetGla2, Hg19, Hg38, Hs1, LatCha1, LoxAfr3, MacEug2, MacFas5, ManPen1, MelGal1, MelUnd1, MicMur2, Mm10, Mm39, Mm9, MonDom5, MyoLuc2, NanPar1, NasLar1, NeoSch1, NomLeu3, OchPri3, OreNil2, OrnAna2, OryCun2, OryLat2, OtoGar3, OviAri4, PanPan3, PanTro6, PapAnu4, PapHam1, PetMar3, PonAbe2, PonAbe3, PriPac1, ProCap1, PteVam1, RheMac10, Rn6, SacCer3, SaiBol1, SarHar1, SorAra2, SpeTri2, StrPur2, SusScr11, TaeGut2, TarSyr2, TetNig2, ThaSir1, TriMan1, TupBel1, TurTru2, UusFur1, VicPac2, WuhCor1, XenTro10

Class Method Summary

• .open(*args, **kwargs, &block) ⇒ Object

Instance Method Summary

• #initialize(**kwargs) ⇒ ReferenceGenome constructor

  A new instance of ReferenceGenome.

Constructor Details

#initialize(**kwargs) ⇒ ReferenceGenome

Returns a new instance of ReferenceGenome.

# File 'lib/bio/twobit/reference_genome.rb', line 10

def initialize(**kwargs)
  @local_name ||= File.basename(@data_url)
  super(prepare_data, **kwargs)
end

Class Method Details

.open(*args, **kwargs, &block) ⇒ Object

Raises:

• (ArgumentError)

# File 'lib/bio/twobit/reference_genome.rb', line 4

def self.open(*args, **kwargs, &block)
  raise ArgumentError, "#{self}#open() does not accept arguments" if args.any?

  super(**kwargs, &block)
end